CDS

Accession Number TCMCG016C04864
gbkey CDS
Protein Id OMO95728.1
Location complement(join(16408..16925,17022..17168,17259..18585,18673..18726))
Organism Corchorus capsularis
locus_tag CCACVL1_05291

Protein

Length 681aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01007599.1
Definition Leucine-rich repeat, typical subtype [Corchorus capsularis]
Locus_tag CCACVL1_05291

EGGNOG-MAPPER Annotation

COG_category T
Description Leucine-rich repeats, typical (most populated) subfamily
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01009        [VIEW IN KEGG]
ko04812        [VIEW IN KEGG]
KEGG_ko ko:K17550        [VIEW IN KEGG]
ko:K19750        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000226        [VIEW IN EMBL-EBI]
GO:0001578        [VIEW IN EMBL-EBI]
GO:0001889        [VIEW IN EMBL-EBI]
GO:0001947        [VIEW IN EMBL-EBI]
GO:0002009        [VIEW IN EMBL-EBI]
GO:0003002        [VIEW IN EMBL-EBI]
GO:0003007        [VIEW IN EMBL-EBI]
GO:0003143        [VIEW IN EMBL-EBI]
GO:0003341        [VIEW IN EMBL-EBI]
GO:0003352        [VIEW IN EMBL-EBI]
GO:0003356        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0005856        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0005929        [VIEW IN EMBL-EBI]
GO:0005930        [VIEW IN EMBL-EBI]
GO:0006928        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007010        [VIEW IN EMBL-EBI]
GO:0007017        [VIEW IN EMBL-EBI]
GO:0007018        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007368        [VIEW IN EMBL-EBI]
GO:0007389        [VIEW IN EMBL-EBI]
GO:0007507        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009790        [VIEW IN EMBL-EBI]
GO:0009799        [VIEW IN EMBL-EBI]
GO:0009855        [VIEW IN EMBL-EBI]
GO:0009887        [VIEW IN EMBL-EBI]
GO:0009888        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0016607        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0030030        [VIEW IN EMBL-EBI]
GO:0030031        [VIEW IN EMBL-EBI]
GO:0030323        [VIEW IN EMBL-EBI]
GO:0030324        [VIEW IN EMBL-EBI]
GO:0031016        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032838        [VIEW IN EMBL-EBI]
GO:0032879        [VIEW IN EMBL-EBI]
GO:0032886        [VIEW IN EMBL-EBI]
GO:0034622        [VIEW IN EMBL-EBI]
GO:0035050        [VIEW IN EMBL-EBI]
GO:0035082        [VIEW IN EMBL-EBI]
GO:0035239        [VIEW IN EMBL-EBI]
GO:0035295        [VIEW IN EMBL-EBI]
GO:0035469        [VIEW IN EMBL-EBI]
GO:0036158        [VIEW IN EMBL-EBI]
GO:0036159        [VIEW IN EMBL-EBI]
GO:0042995        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044430        [VIEW IN EMBL-EBI]
GO:0044441        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044458        [VIEW IN EMBL-EBI]
GO:0044463        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044782        [VIEW IN EMBL-EBI]
GO:0044877        [VIEW IN EMBL-EBI]
GO:0048513        [VIEW IN EMBL-EBI]
GO:0048562        [VIEW IN EMBL-EBI]
GO:0048565        [VIEW IN EMBL-EBI]
GO:0048568        [VIEW IN EMBL-EBI]
GO:0048598        [VIEW IN EMBL-EBI]
GO:0048729        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048732        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051270        [VIEW IN EMBL-EBI]
GO:0055123        [VIEW IN EMBL-EBI]
GO:0060271        [VIEW IN EMBL-EBI]
GO:0060429        [VIEW IN EMBL-EBI]
GO:0060541        [VIEW IN EMBL-EBI]
GO:0060562        [VIEW IN EMBL-EBI]
GO:0060632        [VIEW IN EMBL-EBI]
GO:0060972        [VIEW IN EMBL-EBI]
GO:0061008        [VIEW IN EMBL-EBI]
GO:0061371        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070286        [VIEW IN EMBL-EBI]
GO:0070840        [VIEW IN EMBL-EBI]
GO:0070925        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0071907        [VIEW IN EMBL-EBI]
GO:0071910        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0072359        [VIEW IN EMBL-EBI]
GO:0097014        [VIEW IN EMBL-EBI]
GO:0099568        [VIEW IN EMBL-EBI]
GO:0120025        [VIEW IN EMBL-EBI]
GO:0120031        [VIEW IN EMBL-EBI]
GO:0120036        [VIEW IN EMBL-EBI]
GO:0120038        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGAAATTCAAGTGTTTCTCTCTATTCACTGGGAAGAAAAAGCAAATTAAGTTGGGTGATGTATCTTCAAAAGCTGGTGAACAAAAGAAAGGGGTTAGAACCCTCCAAATTAAGCTCCAACAACCAGTGCAGCCTCTTGAGAGTGATGAACTGAAATCAACAACTTTTACTGTCCCTGTACCTGACGGCTTTCAGGAGGATTCTCTTTGTAATGTCAAGGTAATCAGCCACGAGAATCCTGTTGGATGTGAAGCAGCATATGAAGGGGAGGATGAGCATGAAGAGAATGCGTCAATTAAGAGAGAATTCTCTGACTTTGATCTCCAAGCCCATGTAGCCAATTCGGGTGAGGAAGAATTCACTTTCAGTACCAAAAGGGTGGCTTCTTCAGATTCCTTTGACACTGAAGTGAAGGAAGAGTTTGTGTACGGAGCAGAGGAAGCTGCTGAAAAGGTTGTTGATATGATTCAAAGTGGACATATTAGTGATCCAGGGATTGGCAGGGCTGAGTATTGGGCTTCACCAAAGCTTAAGCGCTCCTGCTCTAATCTGGAGACAAGCAATATTGTGCTAAGAAGGGTAGCTGATCAGCTGCCTCCTTCTAAGTCTCAGTCCTTTGAACAATTACATGAGTTAGCTGCAACTGTAAGGGATGACTTTAATCCTGGTAGCCCTGCTTCTGTAATGACTCGTTGCAGTGCCGACAGAGTGATGTTGAAAAAACATTCTTCCAGTCAAGTTCTACCTTCCAGAAGCAGAAGGTTATGGTGGAAATTGTTCCTCTGGAGTCACCGGAATTTGCACAAACATTGGACTATAAAACCACAGCCTCTTCCTGTGAGTGCTACCTTGAACCAGCAAGGTGGGTATTCATCAGATACAGTTGAGCTACATCGAGCAATGAAACTGAGCAAAATGGAATCACCTGGATCATTTACTGGAGAGTCCTTGAACAAAGACTTTACTGGCAACTGCGAAGACAACCAGAGCTGGAAGGGATTTCACAACGGAGTTTCTGGTCTGTGGCCCCAGAATCAATGGGTTGCACTCCCTTCTCCATCGTCATCCTTCACAAGAGTGAATGAGTGGGTTCTAGATCTTGAAACTGAGCCTTGTGATGATGATGTGAACTATGAAGAGGGCATAGCCTTTCCACCTTCTCCTGACTCCGGTAAATTACCAGCAAGAAGCACAACCCAGTTGACTCGGCATCCAGATATGAATCTGTCTGAGGAGATTATACATGCCAATAATGTCATTCAGTCTCTCAATTCATCCTCAACTGTTGCTCACATTTCAGGAATAGGTTTAAAAGCTATTCCTATCATCTCACACTTGGCCAGCCTTCGGTCTGTCAACTTGTCAAACAACTTAATAGCCCACATTACTCCAGGATCACTGCCAAAGGGCCTTCATACACTCAATTTGTCAAAAAACAAGATCAATACCATTGAAGGACTTAGAGAATTGACTCGATTGCGAATAGTTGACCTCAGTTATAACCGAATTGCTCGACTTGGACATGGGTTGTCAAACTGCACACTGATCAAAGAACTGTATTTAGCTGGGAACAAGATAAGTGATGTAGAAGGGCTGCATAGGCTTTTGAAATTAACAGTCTTAGACCTGAGCTTCAACAAGATAACAACAACAAAAGCACTGGGCCAGCTTGTTGCCAACTACAACTCATTGCAAGCATTGAATCTGTTGGGAAATCCACTTCAGAGCAATATCAGTGATGACCAGCTGCGCAAGGCAGTATGTAGCTTACTCCCTAAGCTTACATACCTGAACAAGCAACCCATAAAACCACAAAGGGCAAGGGAAGTGCTCACCGATAGTGTTGCCAAGGCTGCCCTAGGGAGTGGAAGTTGGAGCTCTCGGAAAAAAGCAGTGAAACGAGCAAGCCAAGGTGGAACAACATCTTCCAGTGTGCACAGAAGCAGTATGGCAAGTGGGCAGAAGAGCAAGAATAAATCAAAGAGCAGAAGTCGCCATCACTCATCCCTAAAGTCACATGCGCCAGCTTCTTCTTCCCGTTAG
Protein:  
MAKFKCFSLFTGKKKQIKLGDVSSKAGEQKKGVRTLQIKLQQPVQPLESDELKSTTFTVPVPDGFQEDSLCNVKVISHENPVGCEAAYEGEDEHEENASIKREFSDFDLQAHVANSGEEEFTFSTKRVASSDSFDTEVKEEFVYGAEEAAEKVVDMIQSGHISDPGIGRAEYWASPKLKRSCSNLETSNIVLRRVADQLPPSKSQSFEQLHELAATVRDDFNPGSPASVMTRCSADRVMLKKHSSSQVLPSRSRRLWWKLFLWSHRNLHKHWTIKPQPLPVSATLNQQGGYSSDTVELHRAMKLSKMESPGSFTGESLNKDFTGNCEDNQSWKGFHNGVSGLWPQNQWVALPSPSSSFTRVNEWVLDLETEPCDDDVNYEEGIAFPPSPDSGKLPARSTTQLTRHPDMNLSEEIIHANNVIQSLNSSSTVAHISGIGLKAIPIISHLASLRSVNLSNNLIAHITPGSLPKGLHTLNLSKNKINTIEGLRELTRLRIVDLSYNRIARLGHGLSNCTLIKELYLAGNKISDVEGLHRLLKLTVLDLSFNKITTTKALGQLVANYNSLQALNLLGNPLQSNISDDQLRKAVCSLLPKLTYLNKQPIKPQRAREVLTDSVAKAALGSGSWSSRKKAVKRASQGGTTSSSVHRSSMASGQKSKNKSKSRSRHHSSLKSHAPASSSR